What is shipping automation and how can it be implemented in your online store?
Jul 12, 2025
Shipping automation means using intelligent systems to execute shipping operations automatically, such as issuing delivery (shipping) labels, selecting the carrier, and tracking orders. To implement it, you should analyze your store’s needs, choose an integrated platform, connect it to the store, configure execution rules, then test performance and optimize.
If you could press a single button to complete hundreds of complex operations in seconds, would you hesitate?
That’s exactly how shipping automation looks in e-commerce: it isn’t a nice-to-have feature, but a radical shift in how you operate—customers don’t see it, but they feel its impact with every order that arrives fast, accurately, and with an ideal experience.
Smart stores no longer seek only fast shipping and delivery solutions, but systems that think and act on their behalf—systems that issue shipping labels automatically, choose the most suitable carrier, and monitor status moment by moment without human intervention. This is the essence of automating logistics operations: an innovative way to survive in a market that punishes delays and rewards speed and precision.
In this article, we’ll shed light on what shipping automation means and how to actually apply it in your store, while highlighting its challenges and benefits.
To begin, what is shipping automation?
Simply put, it’s the use of smart technologies and systems to perform tasks related to shipping orders automatically, without requiring manual intervention at every step. Instead of entering data manually for each order, automation systems connect your online store with shipping and logistics services, taking over processes automatically based on predefined settings and preferences.
This way, shipping transforms from a tiring process full of potential errors into a precise, automated sequence of steps that saves time, cuts costs, and improves the customer experience. These tasks include, for example:
Issuing shipping labels.
Selecting the appropriate shipping and delivery companies.
Calculating shipping costs.
Tracking order status and sending customer notifications.
✨ Read in detail about the meaning of automation and its key types
How does logistics process automation work?
Automating logistics processes is a comprehensive re-engineering of the supply chain, relying on integration between digital systems to create an operating environment characterized by accuracy, speed, and real-time responsiveness.
Automation isn’t limited to isolated tasks like printing a shipping label or sending a text message; it extends to a connected network of intelligent actions across multiple stages, including:
Real-time data integration:
The process starts when a customer completes an order on your online store. Order data is automatically passed to the connected shipping management system (via APIs), triggering a series of automated actions without human intervention.
Decision-making through execution rules:
Based on predefined criteria and conditions (such as destination, shipment weight, and delivery speed), the system selects the most suitable carrier and determines the optimal service in terms of price and time.
Automatically generating documents and executing operations:
In this important stage, shipping labels are issued, the tracking number is linked to the order, and the store system is updated—while simultaneously notifying the customer via email, WhatsApp, or SMS. All of this happens in real time.
Continuous monitoring and analysis:
Throughout the shipment’s journey, automated systems monitor delivery status updates and refresh the merchant dashboard, with the ability to trigger automatic alerts in case of delays or failed deliveries.
Performance optimization using data:
At this stage, data collected from every shipment is used to generate analytical reports that inform strategic decisions—such as improving carrier contracting terms or redesigning warehouse processes.
In short, logistics automation shifts the system from a model dependent on manual intervention to a proactive, automatic framework—ensuring operational consistency, reducing errors, and enabling scale without multiplying operating costs.
Why is shipment automation important for online stores?
Shipment automation is a fundamental pillar for boosting operational efficiency in e-commerce stores. It helps to:
Turn routine, repetitive tasks into automated workflows executed according to pre-programmed rules—reducing human error, speeding order processing, and improving the accuracy of shipping data, which directly elevates customer experience and trust.
Send real-time order status updates and provide flexible shipping options, both of which play a decisive role in increasing customer satisfaction and retention over the long term.
Deliver significant operational savings, by reducing the manpower required to process orders and minimizing costs arising from delays or re-shipments due to errors.
Support systems for store growth, enabling you to handle rising order volumes without compromising service quality.
Provide accurate, real-time data and reports that support strategic decisions about shipping costs, carrier performance, and high-demand regions—giving your store a strong competitive edge in a market rapidly embracing smart solutions.
To implement shipping automation in your store, you should follow several steps—the most important of which we outline below.
Essential steps to implement shipping automation in your online store
1. Analyze your store’s logistics needs:
Before applying any automation system, you must understand your store’s needs in terms of order volume, product types, delivery regions, and the carriers you work with.
This analysis helps you identify bottlenecks and recurring errors, choose the most suitable system or platform to address them, and ensure the automation you implement aligns with your operations and supports your objectives.
2. Choose a reliable, integrated automation platform:
The quality of automation depends on the strength of the system you use. It’s crucial to choose a trusted platform that offers direct integrations with multiple carriers, supports label generation, order management and tracking, and automated customer notifications.
You should also be able to configure smart rules that run automatically based on product type, customer location, available delivery options, and more.
3. Connect your online store to the automation system:
After choosing the right platform, connect your online store to the automation system via APIs or ready-made plugins if you’re using solutions like Zid, Shopify, or WooCommerce.
This integration enables seamless data flow between the two systems, so shipping labels are created automatically as soon as an order is placed—without manual intervention.
4. Configure automatic shipping rules:
This step is the core of shipping automation. You define the rules the system should apply automatically. For example, you can assign a specific carrier for orders within Riyadh, or choose a certain carrier if the shipment weight exceeds a threshold. These rules minimize ad-hoc human decisions and keep operations consistently efficient.
5. Test the system and monitor performance:
Once automation is live, thoroughly test all possible scenarios and monitor performance in terms of speed, carrier selection accuracy, and tracking updates. It’s also advisable to review system reports regularly to spot optimization opportunities and ensure automation continues to support your operational goals effectively.
A practical example: automating your shipments with OTO
OTO offers an intelligent two-level shipping automation system—basic and advanced—that gives you full control over selecting the optimal carrier for every order without manual intervention.
At the basic level—available starting from the Growth plan—you can create dynamic rules to automatically distribute shipments among the carriers connected to your account based on criteria like weight, destination, product type, or contract terms. For example, you can set a rule to exclude a specific carrier if the shipment exceeds 25 kg, and the system will enforce it automatically.
At the advanced level—available from the Business plan onward—automation evolves into “operational intelligence”. You can configure over 50 execution rules and test them before activation to avoid conflicts, and even recreate shipments automatically if a carrier takes no action—accelerating delivery without delays.
Automation in OTO supports all carriers linked to your account, whether through your own contracts or OTO’s discounted rates. This gives you great flexibility to control shipping costs and choose the best option based on performance, speed, or even adherence to the Service Level Agreement (SLA).
All of this is managed from a simple interface inside OTO, saving your team time and effort and significantly boosting operational efficiency.
E-commerce stores face several challenges when implementing shipping automation—let’s explore them next.
Top challenges of implementing shipping automation and how to overcome them
Implementing shipping automation brings a fundamental shift to managing online stores, but it comes with challenges that may hinder deployment or affect expected results, including:
Difficulty in understanding and planning automation rules:
Defining the right rules for shipping automation is among the most sensitive phases. It requires deep knowledge of order behavior, product categorizations, and carrier details. Poorly designed or overly complex rules can backfire—routing shipments to unsuitable carriers or imposing unnecessary costs on the store.
To overcome this challenge, you should:
Start by analyzing historical order data to identify clear patterns that can be automated (such as weight, destinations, and product categories).
Begin with simple rules—e.g., assign light orders to a specific carrier—then iterate gradually.
Leverage ready-made templates offered by specialized platforms like OTO, which simplify automation setup without requiring deep technical expertise.
Poor integration between the store systems and the automation platform:
Some merchants encounter technical issues when connecting their store to a shipping automation platform, especially if the store is built on a custom system or a complex e-commerce platform. This can delay activation and result in an unstable or error-prone experience. To address this:
Choose an automation platform that integrates smoothly with popular e-commerce systems—like OTO, which connects to 30+ well-known platforms (Shopify, WooCommerce, Magento, Zid, Mutajara, etc.).
Ensure compatible APIs are available on both sides before starting the integration.
Work with a developer experienced in system integrations to guarantee proper implementation and handle complexities.
Follow up regularly with the platform’s support to ensure updates stay compatible with your setup.
Reluctance to invest in automation:
Some small and medium stores hesitate to invest in automation systems, thinking they’re only for large companies or too costly and unnecessary in early growth stages. This hesitation can delay scaling and increase long-term operating costs. To overcome it:
Demonstrate the ROI of automation by comparing time and cost before vs. after implementation.
Start with partial automation to reduce cost—such as automating label printing or notifications only.
Review success stories from similar stores that benefited from early-stage automation.
Relying entirely on automation without human oversight:
Despite its importance, relying exclusively on automation without oversight can lead to serious issues—like repeatedly executing incorrect rules or system failures that go unnoticed. Lack of human supervision can harm operations instead of improving them. To avoid this:
Assign a human supervisor to review reports, rule performance, and make adjustments as needed.
Set up automatic alerts for failures or rule-execution conflicts.
Allocate weekly time to analyze automation performance and measure its impact on speed and cost.
Use periodic analytical reports to rigorously evaluate automation outcomes and make informed decisions.
It’s worth noting that shipping automation offers many advantages that enhance e-commerce efficiency.
Benefits of shipping automation for online stores
Improved customer experience:
Success in e-commerce is measured by customer satisfaction. Shipping automation ensures orders are fulfilled without delay, order status is updated in real time, and immediate notifications are sent at every stage. This level of transparency and accuracy builds trust and makes customers more likely to repurchase and recommend your store.
Reduced operational errors caused by human intervention:
Traditional shipping processes are prone to errors such as incorrect data entry, forgetting to print a label, or choosing an unsuitable carrier. Shipping automation reduces such errors by executing processes according to clear, pre-programmed rules—cutting returns, inquiries, and complaints.
Faster order fulfillment and time savings:
By automating shipping steps, processing time is reduced from minutes to mere seconds. The system selects the carrier, issues the label, links it to the order, and sends updates automatically—saving time and easing pressure on your teams.
Lower operating costs and higher efficiency:
Every minute saved means lower costs, and every avoided mistake prevents a potential loss. Automation reduces the need for large teams to process orders and helps avoid expenses caused by errors or delays—achieving better results with fewer resources.
Easier scaling and higher capacity to handle more orders:
Stores that rely on automation don’t struggle with seasonal spikes. An automated system runs smoothly regardless of order volume, making it easy to scale without restructuring teams or incurring unplanned costs.
Better data management and decisions based on precise indicators:
Shipping automation doesn’t just execute tasks—it tracks and records every step, generating real-time reports and analytics. You can evaluate carrier performance, identify delay hotspots, and break down shipping costs by product or region—giving you strategic visibility to improve and make more informed decisions.
Final word
Shipping automation represents a structural transformation in the operating model of online stores, enabling merchants to overcome traditional challenges in order management, delivery, and working with carriers—through smart solutions executed with accuracy, speed, and efficiency.
Success doesn’t depend solely on having the right tools; it also requires organizational awareness, careful planning, and continuous optimization of rules and performance. Every challenge can be overcome with a thoughtful plan, and every mistake can be corrected when there’s vision and flexibility.
Therefore, you should start building an automated system from the basics and scale progressively—choosing technologies that support this transformation with efficiency and transparency. The future of commerce won’t wait, and those who don’t invest in automation today may find themselves lagging tomorrow in a market that only expands for those most capable of adapting and innovating.
Ehab Mahmoud